Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Sh3d21Q7TSG5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3d21Q7TSG5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3d21Q7TSG5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Mir6404-201ENSMUST00000183699 94 ntBASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Gm17807-201ENSMUST00000186869 298 ntBASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Gm21362-201ENSMUST00000194272 928 ntBASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3d21Q7TSG5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms