Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Gm7367-201ENSMUST00000057611 492 ntBASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 App-207ENSMUST00000227737 2827 ntBASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm8Q6ZWM4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Ank2-226ENSMUST00000189368 339 ntBASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm8Q6ZWM4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gm21362-201ENSMUST00000194272 928 ntBASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm8Q6ZWM4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lsm8Q6ZWM4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm8Q6ZWM4 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.54■□□□□ 0.24
Lsm8Q6ZWM4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm8Q6ZWM4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm8Q6ZWM4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm8Q6ZWM4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm8Q6ZWM4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm8Q6ZWM4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms