Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.77■□□□□ 0.43
Scn10aQ6QIY3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.77■□□□□ 0.43
Scn10aQ6QIY3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn10aQ6QIY3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn10aQ6QIY3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Gm28630-201ENSMUST00000187806 498 ntBASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn10aQ6QIY3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Gm18737-201ENSMUST00000173594 937 ntBASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn10aQ6QIY3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn10aQ6QIY3 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.74■□□□□ 0.43
Scn10aQ6QIY3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn10aQ6QIY3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn10aQ6QIY3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn10aQ6QIY3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn10aQ6QIY3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn10aQ6QIY3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn10aQ6QIY3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Gm17837-201ENSMUST00000186435 985 ntBASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn10aQ6QIY3 Gm13453-201ENSMUST00000118708 357 ntBASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Gm14719-201ENSMUST00000121891 340 ntBASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms