Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Gm25144-201ENSMUST00000179561 110 ntBASIC13.3□□□□□ -0.28
Rif1Q6PR54 Gm25352-201ENSMUST00000179815 110 ntBASIC13.3□□□□□ -0.28
Rif1Q6PR54 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.29□□□□□ -0.28
Rif1Q6PR54 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.29□□□□□ -0.28
Rif1Q6PR54 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Mir1982-201ENSMUST00000157368 74 ntBASIC13.29□□□□□ -0.28
Rif1Q6PR54 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.29□□□□□ -0.28
Rif1Q6PR54 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.29□□□□□ -0.28
Rif1Q6PR54 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.29□□□□□ -0.28
Rif1Q6PR54 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rif1Q6PR54 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Gm12957-201ENSMUST00000117835 377 ntBASIC13.28□□□□□ -0.28
Rif1Q6PR54 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.28□□□□□ -0.28
Rif1Q6PR54 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.28□□□□□ -0.28
Rif1Q6PR54 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rif1Q6PR54 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rif1Q6PR54 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rif1Q6PR54 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rif1Q6PR54 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rif1Q6PR54 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rif1Q6PR54 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rif1Q6PR54 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rif1Q6PR54 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms