Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.46■□□□□ 0.87
Chd4Q6PDQ2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd4Q6PDQ2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd4Q6PDQ2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd4Q6PDQ2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms