Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm4Q6IRU2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm4Q6IRU2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm4Q6IRU2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tpm4Q6IRU2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tpm4Q6IRU2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tpm4Q6IRU2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Gm13559-201ENSMUST00000120476 863 ntBASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Gm18959-201ENSMUST00000208954 655 ntBASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tpm4Q6IRU2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
Tpm4Q6IRU2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms