Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.61■□□□□ 0.57
Ctr9Q62018 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Ctr9Q62018 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.61■□□□□ 0.57
Ctr9Q62018 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.61■□□□□ 0.57
Ctr9Q62018 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ctr9Q62018 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ctr9Q62018 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.6■□□□□ 0.57
Ctr9Q62018 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ctr9Q62018 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Ctr9Q62018 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.6■□□□□ 0.57
Ctr9Q62018 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Gm6257-201ENSMUST00000163864 910 ntBASIC18.6■□□□□ 0.57
Ctr9Q62018 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.6■□□□□ 0.57
Ctr9Q62018 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ctr9Q62018 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.6■□□□□ 0.57
Ctr9Q62018 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ctr9Q62018 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctr9Q62018 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Ctr9Q62018 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.59■□□□□ 0.57
Ctr9Q62018 Gm27646-201ENSMUST00000183989 110 ntBASIC18.59■□□□□ 0.57
Ctr9Q62018 Gm6443-201ENSMUST00000203599 874 ntBASIC18.59■□□□□ 0.57
Ctr9Q62018 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Ctr9Q62018 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ctr9Q62018 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Ctr9Q62018 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctr9Q62018 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.58■□□□□ 0.57
Ctr9Q62018 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctr9Q62018 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctr9Q62018 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ctr9Q62018 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ctr9Q62018 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctr9Q62018 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ctr9Q62018 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctr9Q62018 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctr9Q62018 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.58■□□□□ 0.56
Ctr9Q62018 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.58■□□□□ 0.56
Ctr9Q62018 Mir5126-201ENSMUST00000175513 77 ntBASIC18.58■□□□□ 0.56
Ctr9Q62018 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.58■□□□□ 0.56
Ctr9Q62018 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.58■□□□□ 0.56
Ctr9Q62018 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.58■□□□□ 0.56
Ctr9Q62018 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ctr9Q62018 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.58■□□□□ 0.56
Ctr9Q62018 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctr9Q62018 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.57■□□□□ 0.56
Ctr9Q62018 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms