Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf1Q5U4C3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Auts2-212ENSMUST00000178555 309 ntBASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Gm5312-201ENSMUST00000203728 547 ntBASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Scaf1Q5U4C3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scaf1Q5U4C3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scaf1Q5U4C3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scaf1Q5U4C3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Gm20553-201ENSMUST00000204205 844 ntBASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf1Q5U4C3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Gm14701-201ENSMUST00000117156 348 ntBASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf1Q5U4C3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf1Q5U4C3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms