Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav2Q5R1I9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav2Q5R1I9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm7230-201ENSMUST00000173026 815 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Mir5131-201ENSMUST00000175426 93 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm8825-201ENSMUST00000182565 998 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm4518-201ENSMUST00000182638 718 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav2Q5R1I9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms