Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-4Q5R1I0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Gm15173-201ENSMUST00000122049 433 ntBASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav6d-4Q5R1I0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-4Q5R1I0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms