Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
R3hdm4Q4VBF2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Gm13884-201ENSMUST00000118103 829 ntBASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
R3hdm4Q4VBF2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Gm11780-201ENSMUST00000136880 516 ntBASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Prob1-201ENSMUST00000097619 3021 ntBASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
R3hdm4Q4VBF2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Gm10355-201ENSMUST00000097146 517 ntBASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
R3hdm4Q4VBF2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
R3hdm4Q4VBF2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Mir8098-201ENSMUST00000184011 137 ntBASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Gm7461-201ENSMUST00000058918 827 ntBASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Rps4l-201ENSMUST00000071745 943 ntBASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
R3hdm4Q4VBF2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms