Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syne3Q4FZC9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syne3Q4FZC9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syne3Q4FZC9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.82■□□□□ 0.28
Syne3Q4FZC9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Syne3Q4FZC9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syne3Q4FZC9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syne3Q4FZC9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syne3Q4FZC9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Olfr129-201ENSMUST00000122318 993 ntBASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Gm17807-201ENSMUST00000186869 298 ntBASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syne3Q4FZC9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Syne3Q4FZC9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Mir3081-201ENSMUST00000175305 84 ntBASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syne3Q4FZC9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syne3Q4FZC9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms