Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Gm9172-201ENSMUST00000212092 954 ntBASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdkl5Q3UTQ8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Prob1-201ENSMUST00000097619 3021 ntBASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl5Q3UTQ8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Gm15372-201ENSMUST00000120729 834 ntBASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl5Q3UTQ8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.3■□□□□ 0.52
Cdkl5Q3UTQ8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Gm17807-201ENSMUST00000186869 298 ntBASIC18.29■□□□□ 0.52
Cdkl5Q3UTQ8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms