Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.71□□□□□ -0.21
Q3U1D9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.71□□□□□ -0.21
Q3U1D9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.71□□□□□ -0.21
Q3U1D9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.71□□□□□ -0.21
Q3U1D9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3U1D9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3U1D9 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.71□□□□□ -0.21
Q3U1D9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Q3U1D9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.71□□□□□ -0.21
Q3U1D9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3U1D9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Q3U1D9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Q3U1D9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Q3U1D9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Q3U1D9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Q3U1D9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Q3U1D9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Q3U1D9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Q3U1D9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Q3U1D9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.7□□□□□ -0.22
Q3U1D9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Gm11764-201ENSMUST00000120221 623 ntBASIC13.7□□□□□ -0.22
Q3U1D9 Gm27646-201ENSMUST00000183989 110 ntBASIC13.7□□□□□ -0.22
Q3U1D9 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.7□□□□□ -0.22
Q3U1D9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.7□□□□□ -0.22
Q3U1D9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Q3U1D9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Q3U1D9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.69□□□□□ -0.22
Q3U1D9 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.69□□□□□ -0.22
Q3U1D9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Q3U1D9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Q3U1D9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.69□□□□□ -0.22
Q3U1D9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Gm14140-201ENSMUST00000119999 995 ntBASIC13.69□□□□□ -0.22
Q3U1D9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Q3U1D9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.69□□□□□ -0.22
Q3U1D9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Q3U1D9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Q3U1D9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Q3U1D9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q3U1D9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Q3U1D9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Q3U1D9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.68□□□□□ -0.22
Q3U1D9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q3U1D9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms