Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm20760-201ENSMUST00000179197 648 ntBASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccbe1Q3MI99 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccbe1Q3MI99 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Mir7071-201ENSMUST00000184847 69 ntBASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccbe1Q3MI99 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccbe1Q3MI99 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Gm13168-201ENSMUST00000121771 632 ntBASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms