Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Gm44771-201ENSMUST00000206975 626 ntBASIC13.19□□□□□ -0.3
Tff1Q08423 Gm7213-201ENSMUST00000215977 950 ntBASIC13.19□□□□□ -0.3
Tff1Q08423 Gm18115-201ENSMUST00000221209 621 ntBASIC13.19□□□□□ -0.3
Tff1Q08423 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Tff1Q08423 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tff1Q08423 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Tff1Q08423 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tff1Q08423 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tff1Q08423 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.19□□□□□ -0.3
Tff1Q08423 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tff1Q08423 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tff1Q08423 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.18□□□□□ -0.3
Tff1Q08423 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.18□□□□□ -0.3
Tff1Q08423 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
Tff1Q08423 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.18□□□□□ -0.3
Tff1Q08423 Gm9013-201ENSMUST00000132939 882 ntBASIC13.18□□□□□ -0.3
Tff1Q08423 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.18□□□□□ -0.3
Tff1Q08423 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.18□□□□□ -0.3
Tff1Q08423 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tff1Q08423 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tff1Q08423 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tff1Q08423 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tff1Q08423 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tff1Q08423 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tff1Q08423 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.17□□□□□ -0.3
Tff1Q08423 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Gm11336-201ENSMUST00000118168 334 ntBASIC13.17□□□□□ -0.3
Tff1Q08423 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.17□□□□□ -0.3
Tff1Q08423 Gm18669-201ENSMUST00000216049 778 ntBASIC13.17□□□□□ -0.3
Tff1Q08423 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Tff1Q08423 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tff1Q08423 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Tff1Q08423 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tff1Q08423 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tff1Q08423 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.16□□□□□ -0.3
Tff1Q08423 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tff1Q08423 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms