Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Npas1P97459 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Npas1P97459 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.31□□□□□ -0.28
Npas1P97459 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Npas1P97459 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Npas1P97459 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Npas1P97459 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.31□□□□□ -0.28
Npas1P97459 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Npas1P97459 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.3□□□□□ -0.28
Npas1P97459 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Npas1P97459 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Npas1P97459 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Npas1P97459 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Trmt13-210ENSMUST00000198454 880 ntBASIC13.3□□□□□ -0.28
Npas1P97459 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Npas1P97459 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Npas1P97459 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npas1P97459 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Npas1P97459 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.29□□□□□ -0.28
Npas1P97459 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Npas1P97459 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Phf7-203ENSMUST00000226565 1971 ntBASIC13.29□□□□□ -0.28
Npas1P97459 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Gm12527-201ENSMUST00000117967 564 ntBASIC13.29□□□□□ -0.28
Npas1P97459 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Npas1P97459 Gm10698-201ENSMUST00000182663 604 ntBASIC13.29□□□□□ -0.28
Npas1P97459 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Npas1P97459 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.29□□□□□ -0.28
Npas1P97459 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 App-207ENSMUST00000227737 2827 ntBASIC13.29□□□□□ -0.28
Npas1P97459 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.29□□□□□ -0.28
Npas1P97459 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.29□□□□□ -0.28
Npas1P97459 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npas1P97459 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms