Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b6P59708 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Gm15565-201ENSMUST00000118890 427 ntBASIC14.07□□□□□ -0.16
Sf3b6P59708 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.07□□□□□ -0.16
Sf3b6P59708 Gm29707-201ENSMUST00000196325 491 ntBASIC14.07□□□□□ -0.16
Sf3b6P59708 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.07□□□□□ -0.16
Sf3b6P59708 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b6P59708 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Sf3b6P59708 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b6P59708 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b6P59708 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.05□□□□□ -0.16
Sf3b6P59708 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b6P59708 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sf3b6P59708 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b6P59708 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.04□□□□□ -0.16
Sf3b6P59708 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms