Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm3375-201ENSMUST00000203929 796 ntBASIC17.68■□□□□ 0.42
Tpm1P58771 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tpm1P58771 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Tpm1P58771 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.68■□□□□ 0.42
Tpm1P58771 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.68■□□□□ 0.42
Tpm1P58771 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm1P58771 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.68■□□□□ 0.42
Tpm1P58771 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.67■□□□□ 0.42
Tpm1P58771 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm1P58771 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tpm1P58771 Gm36967-201ENSMUST00000193814 266 ntBASIC17.67■□□□□ 0.42
Tpm1P58771 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm1P58771 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.67■□□□□ 0.42
Tpm1P58771 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm1P58771 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tpm1P58771 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.67■□□□□ 0.42
Tpm1P58771 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm1P58771 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.66■□□□□ 0.42
Tpm1P58771 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Tpm1P58771 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Tpm1P58771 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Gm44450-201ENSMUST00000199528 114 ntBASIC17.66■□□□□ 0.42
Tpm1P58771 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm1P58771 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpm1P58771 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.66■□□□□ 0.42
Tpm1P58771 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tpm1P58771 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm1P58771 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.65■□□□□ 0.42
Tpm1P58771 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm1P58771 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tpm1P58771 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.65■□□□□ 0.42
Tpm1P58771 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm1P58771 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm1P58771 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm1P58771 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm1P58771 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.64■□□□□ 0.41
Tpm1P58771 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Tpm1P58771 Gm18421-201ENSMUST00000204122 625 ntBASIC17.64■□□□□ 0.41
Tpm1P58771 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tpm1P58771 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.64■□□□□ 0.41
Tpm1P58771 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
Tpm1P58771 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm1P58771 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tpm1P58771 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms