Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Gm15173-201ENSMUST00000122049 433 ntBASIC14.93□□□□□ -0.02
RoraP51448 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.93□□□□□ -0.02
RoraP51448 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RoraP51448 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RoraP51448 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.93□□□□□ -0.02
RoraP51448 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RoraP51448 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RoraP51448 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RoraP51448 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RoraP51448 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.92□□□□□ -0.02
RoraP51448 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.92□□□□□ -0.02
RoraP51448 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.92□□□□□ -0.02
RoraP51448 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.92□□□□□ -0.02
RoraP51448 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.92□□□□□ -0.02
RoraP51448 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RoraP51448 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RoraP51448 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.92□□□□□ -0.02
RoraP51448 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RoraP51448 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RoraP51448 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.91□□□□□ -0.02
RoraP51448 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.91□□□□□ -0.02
RoraP51448 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.91□□□□□ -0.02
RoraP51448 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.91□□□□□ -0.02
RoraP51448 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.91□□□□□ -0.02
RoraP51448 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RoraP51448 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.91□□□□□ -0.02
RoraP51448 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
RoraP51448 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.91□□□□□ -0.02
RoraP51448 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
RoraP51448 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.91□□□□□ -0.02
RoraP51448 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RoraP51448 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.91□□□□□ -0.02
RoraP51448 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RoraP51448 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.9□□□□□ -0.02
RoraP51448 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Gm6550-201ENSMUST00000187574 993 ntBASIC14.9□□□□□ -0.02
RoraP51448 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.9□□□□□ -0.02
RoraP51448 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 AV026068-213ENSMUST00000223675 1171 ntBASIC14.9□□□□□ -0.02
RoraP51448 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.9□□□□□ -0.02
RoraP51448 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RoraP51448 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RoraP51448 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RoraP51448 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RoraP51448 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RoraP51448 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RoraP51448 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms