Protein–RNA interactions for Protein: P47242

Pax9, Paired box protein Pax-9, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax9P47242 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pax9P47242 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pax9P47242 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pax9P47242 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pax9P47242 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pax9P47242 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pax9P47242 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Pax9P47242 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pax9P47242 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pax9P47242 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Pax9P47242 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pax9P47242 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pax9P47242 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pax9P47242 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.48□□□□□ -0.25
Pax9P47242 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.48□□□□□ -0.25
Pax9P47242 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.48□□□□□ -0.25
Pax9P47242 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.48□□□□□ -0.25
Pax9P47242 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pax9P47242 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pax9P47242 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pax9P47242 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Pax9P47242 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.47□□□□□ -0.25
Pax9P47242 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.47□□□□□ -0.25
Pax9P47242 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.47□□□□□ -0.25
Pax9P47242 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pax9P47242 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.47□□□□□ -0.25
Pax9P47242 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.47□□□□□ -0.25
Pax9P47242 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pax9P47242 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pax9P47242 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pax9P47242 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pax9P47242 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pax9P47242 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pax9P47242 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pax9P47242 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pax9P47242 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pax9P47242 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.46□□□□□ -0.25
Pax9P47242 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pax9P47242 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pax9P47242 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pax9P47242 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.46□□□□□ -0.25
Pax9P47242 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pax9P47242 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.46□□□□□ -0.25
Pax9P47242 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pax9P47242 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Pax9P47242 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Pax9P47242 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pax9P47242 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Pax9P47242 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Pax9P47242 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pax9P47242 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pax9P47242 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Pax9P47242 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Pax9P47242 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pax9P47242 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pax9P47242 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms