Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc2P43407 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sdc2P43407 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc2P43407 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc2P43407 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc2P43407 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sdc2P43407 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc2P43407 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc2P43407 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc2P43407 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Sdc2P43407 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.77■□□□□ 0.43
Sdc2P43407 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Sdc2P43407 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.77■□□□□ 0.43
Sdc2P43407 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc2P43407 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc2P43407 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc2P43407 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc2P43407 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc2P43407 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc2P43407 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.76■□□□□ 0.43
Sdc2P43407 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sdc2P43407 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sdc2P43407 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.76■□□□□ 0.43
Sdc2P43407 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sdc2P43407 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sdc2P43407 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Gm6623-201ENSMUST00000173570 544 ntBASIC17.76■□□□□ 0.43
Sdc2P43407 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sdc2P43407 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Sdc2P43407 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.76■□□□□ 0.43
Sdc2P43407 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc2P43407 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.75■□□□□ 0.43
Sdc2P43407 Gm9013-201ENSMUST00000132939 882 ntBASIC17.75■□□□□ 0.43
Sdc2P43407 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Sdc2P43407 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc2P43407 Asic1-205ENSMUST00000228185 1818 ntBASIC17.75■□□□□ 0.43
Sdc2P43407 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.74■□□□□ 0.43
Sdc2P43407 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.74■□□□□ 0.43
Sdc2P43407 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sdc2P43407 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.74■□□□□ 0.43
Sdc2P43407 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc2P43407 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Sdc2P43407 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Sdc2P43407 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.73■□□□□ 0.43
Sdc2P43407 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc2P43407 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms