Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh2P43247 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh2P43247 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh2P43247 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Msh2P43247 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh2P43247 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh2P43247 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh2P43247 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh2P43247 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh2P43247 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh2P43247 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Msh2P43247 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh2P43247 Gm25016-201ENSMUST00000158399 131 ntBASIC16.33■□□□□ 0.2
Msh2P43247 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh2P43247 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Msh2P43247 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh2P43247 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Msh2P43247 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh2P43247 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh2P43247 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh2P43247 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Msh2P43247 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Msh2P43247 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.32■□□□□ 0.2
Msh2P43247 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.32■□□□□ 0.2
Msh2P43247 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.32■□□□□ 0.2
Msh2P43247 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.32■□□□□ 0.2
Msh2P43247 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Msh2P43247 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Msh2P43247 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 BC037039-201ENSMUST00000192003 2205 ntBASIC16.32■□□□□ 0.2
Msh2P43247 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Msh2P43247 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.32■□□□□ 0.2
Msh2P43247 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Msh2P43247 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh2P43247 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Msh2P43247 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Msh2P43247 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.31■□□□□ 0.2
Msh2P43247 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh2P43247 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Msh2P43247 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.31■□□□□ 0.2
Msh2P43247 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.31■□□□□ 0.2
Msh2P43247 Gm18421-201ENSMUST00000204122 625 ntBASIC16.31■□□□□ 0.2
Msh2P43247 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh2P43247 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Msh2P43247 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh2P43247 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh2P43247 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh2P43247 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh2P43247 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.3■□□□□ 0.2
Msh2P43247 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.3■□□□□ 0.2
Msh2P43247 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Msh2P43247 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh2P43247 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh2P43247 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh2P43247 Gm6345-202ENSMUST00000180900 204 ntBASIC16.3■□□□□ 0.2
Msh2P43247 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms