Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Upk2P38575 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Upk2P38575 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk2P38575 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Upk2P38575 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.88□□□□□ -0.19
Upk2P38575 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Upk2P38575 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Upk2P38575 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Upk2P38575 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.88□□□□□ -0.19
Upk2P38575 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk2P38575 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Upk2P38575 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.87□□□□□ -0.19
Upk2P38575 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.87□□□□□ -0.19
Upk2P38575 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Upk2P38575 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.87□□□□□ -0.19
Upk2P38575 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.87□□□□□ -0.19
Upk2P38575 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.87□□□□□ -0.19
Upk2P38575 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Upk2P38575 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.87□□□□□ -0.19
Upk2P38575 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.87□□□□□ -0.19
Upk2P38575 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upk2P38575 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Upk2P38575 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.86□□□□□ -0.19
Upk2P38575 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Upk2P38575 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Upk2P38575 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Upk2P38575 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Upk2P38575 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.86□□□□□ -0.19
Upk2P38575 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.86□□□□□ -0.19
Upk2P38575 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upk2P38575 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms