Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cd40lgP27548 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cd40lgP27548 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.58□□□□□ -0.08
Cd40lgP27548 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.58□□□□□ -0.08
Cd40lgP27548 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cd40lgP27548 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40lgP27548 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd40lgP27548 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.57□□□□□ -0.08
Cd40lgP27548 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cd40lgP27548 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40lgP27548 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.56□□□□□ -0.08
Cd40lgP27548 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Gm13312-201ENSMUST00000119631 718 ntBASIC14.56□□□□□ -0.08
Cd40lgP27548 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Gm28033-201ENSMUST00000184224 96 ntBASIC14.56□□□□□ -0.08
Cd40lgP27548 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.56□□□□□ -0.08
Cd40lgP27548 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.56□□□□□ -0.08
Cd40lgP27548 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd40lgP27548 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd40lgP27548 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.55□□□□□ -0.08
Cd40lgP27548 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.55□□□□□ -0.08
Cd40lgP27548 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.55□□□□□ -0.08
Cd40lgP27548 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cd40lgP27548 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cd40lgP27548 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.55□□□□□ -0.08
Cd40lgP27548 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cd40lgP27548 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd40lgP27548 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms