Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Col8a2P25318 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.21□□□□□ -0.3
Col8a2P25318 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a2P25318 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a2P25318 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.21□□□□□ -0.3
Col8a2P25318 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.2□□□□□ -0.3
Col8a2P25318 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.2□□□□□ -0.3
Col8a2P25318 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col8a2P25318 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.2□□□□□ -0.3
Col8a2P25318 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.2□□□□□ -0.3
Col8a2P25318 Gm12497-201ENSMUST00000138778 237 ntBASIC13.2□□□□□ -0.3
Col8a2P25318 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Col8a2P25318 Gm27646-201ENSMUST00000183989 110 ntBASIC13.2□□□□□ -0.3
Col8a2P25318 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col8a2P25318 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.2□□□□□ -0.3
Col8a2P25318 Gm8655-201ENSMUST00000221159 852 ntBASIC13.2□□□□□ -0.3
Col8a2P25318 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col8a2P25318 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a2P25318 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col8a2P25318 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.19□□□□□ -0.3
Col8a2P25318 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.19□□□□□ -0.3
Col8a2P25318 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.19□□□□□ -0.3
Col8a2P25318 Gm12350-201ENSMUST00000121208 462 ntBASIC13.19□□□□□ -0.3
Col8a2P25318 Gm6089-201ENSMUST00000197666 938 ntBASIC13.19□□□□□ -0.3
Col8a2P25318 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Gm15590-201ENSMUST00000078419 552 ntBASIC13.19□□□□□ -0.3
Col8a2P25318 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col8a2P25318 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.19□□□□□ -0.3
Col8a2P25318 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.19□□□□□ -0.3
Col8a2P25318 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col8a2P25318 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.18□□□□□ -0.3
Col8a2P25318 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Col8a2P25318 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.18□□□□□ -0.3
Col8a2P25318 Gm9172-201ENSMUST00000212092 954 ntBASIC13.18□□□□□ -0.3
Col8a2P25318 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col8a2P25318 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms