Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Gm6858-201ENSMUST00000208582 1468 ntBASIC15□□□□□ -0.01
ApoeP08226 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15□□□□□ -0.01
ApoeP08226 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15□□□□□ -0.01
ApoeP08226 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ApoeP08226 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ApoeP08226 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ApoeP08226 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.99□□□□□ -0.01
ApoeP08226 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.99□□□□□ -0.01
ApoeP08226 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.99□□□□□ -0.01
ApoeP08226 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.99□□□□□ -0.01
ApoeP08226 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.99□□□□□ -0.01
ApoeP08226 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.99□□□□□ -0.01
ApoeP08226 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.99□□□□□ -0.01
ApoeP08226 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ApoeP08226 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ApoeP08226 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ApoeP08226 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ApoeP08226 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ApoeP08226 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.98□□□□□ -0.01
ApoeP08226 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.98□□□□□ -0.01
ApoeP08226 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ApoeP08226 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Gm21814-202ENSMUST00000203277 873 ntBASIC14.98□□□□□ -0.01
ApoeP08226 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.98□□□□□ -0.01
ApoeP08226 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ApoeP08226 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ApoeP08226 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ApoeP08226 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ApoeP08226 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ApoeP08226 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.97□□□□□ -0.01
ApoeP08226 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.97□□□□□ -0.01
ApoeP08226 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ApoeP08226 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms