Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P04214 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04214 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
P04214 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
P04214 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
P04214 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04214 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04214 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04214 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
P04214 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04214 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.49■□□□□ 0.23
P04214 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.49■□□□□ 0.23
P04214 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
P04214 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.49■□□□□ 0.23
P04214 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.49■□□□□ 0.23
P04214 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.49■□□□□ 0.23
P04214 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.49■□□□□ 0.23
P04214 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Gm12428-201ENSMUST00000119844 727 ntBASIC16.49■□□□□ 0.23
P04214 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.49■□□□□ 0.23
P04214 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.49■□□□□ 0.23
P04214 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.49■□□□□ 0.23
P04214 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.49■□□□□ 0.23
P04214 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.49■□□□□ 0.23
P04214 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.49■□□□□ 0.23
P04214 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.49■□□□□ 0.23
P04214 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.49■□□□□ 0.23
P04214 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
P04214 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
P04214 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
P04214 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P04214 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.48■□□□□ 0.23
P04214 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
P04214 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.48■□□□□ 0.23
P04214 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.48■□□□□ 0.23
P04214 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.48■□□□□ 0.23
P04214 Gm24158-201ENSMUST00000175263 71 ntBASIC16.48■□□□□ 0.23
P04214 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
P04214 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
P04214 Gm2272-201ENSMUST00000194903 582 ntBASIC16.48■□□□□ 0.23
P04214 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.48■□□□□ 0.23
P04214 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
P04214 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
P04214 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.48■□□□□ 0.23
P04214 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04214 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.48■□□□□ 0.23
P04214 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
P04214 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
P04214 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.47■□□□□ 0.23
P04214 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
P04214 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Mir6977-201ENSMUST00000184960 64 ntBASIC16.47■□□□□ 0.23
P04214 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.47■□□□□ 0.23
P04214 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.47■□□□□ 0.23
P04214 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04214 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04214 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.46■□□□□ 0.23
P04214 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms