Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3f3cP02301 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
H3f3cP02301 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
H3f3cP02301 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.59□□□□□ -0.23
H3f3cP02301 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.59□□□□□ -0.23
H3f3cP02301 Gm15372-201ENSMUST00000120729 834 ntBASIC13.59□□□□□ -0.23
H3f3cP02301 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.59□□□□□ -0.23
H3f3cP02301 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
H3f3cP02301 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H3f3cP02301 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H3f3cP02301 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.58□□□□□ -0.23
H3f3cP02301 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
H3f3cP02301 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H3f3cP02301 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H3f3cP02301 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
H3f3cP02301 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.58□□□□□ -0.24
H3f3cP02301 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.58□□□□□ -0.24
H3f3cP02301 Mir6404-201ENSMUST00000183699 94 ntBASIC13.58□□□□□ -0.24
H3f3cP02301 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.58□□□□□ -0.24
H3f3cP02301 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.58□□□□□ -0.24
H3f3cP02301 Gm18669-201ENSMUST00000216049 778 ntBASIC13.58□□□□□ -0.24
H3f3cP02301 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.58□□□□□ -0.24
H3f3cP02301 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.58□□□□□ -0.24
H3f3cP02301 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
H3f3cP02301 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
H3f3cP02301 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H3f3cP02301 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.57□□□□□ -0.24
H3f3cP02301 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.57□□□□□ -0.24
H3f3cP02301 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
H3f3cP02301 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.57□□□□□ -0.24
H3f3cP02301 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.57□□□□□ -0.24
H3f3cP02301 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
H3f3cP02301 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
H3f3cP02301 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
H3f3cP02301 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
H3f3cP02301 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H3f3cP02301 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H3f3cP02301 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.56□□□□□ -0.24
H3f3cP02301 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms