Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Gm42778-201ENSMUST00000199644 553 ntBASIC11.2□□□□□ -0.62
Hbb-b1P02088 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.19□□□□□ -0.62
Hbb-b1P02088 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hbb-b1P02088 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.18□□□□□ -0.62
Hbb-b1P02088 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.18□□□□□ -0.62
Hbb-b1P02088 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms