Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P01852 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.46□□□□□ -0.09
P01852 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.46□□□□□ -0.09
P01852 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.46□□□□□ -0.09
P01852 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
P01852 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.46□□□□□ -0.09
P01852 Gm27741-201ENSMUST00000185060 237 ntBASIC14.46□□□□□ -0.09
P01852 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.46□□□□□ -0.09
P01852 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
P01852 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
P01852 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P01852 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P01852 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P01852 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P01852 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P01852 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P01852 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P01852 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
P01852 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.46□□□□□ -0.1
P01852 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P01852 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.45□□□□□ -0.1
P01852 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.45□□□□□ -0.1
P01852 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
P01852 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
P01852 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.45□□□□□ -0.1
P01852 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.45□□□□□ -0.1
P01852 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.45□□□□□ -0.1
P01852 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
P01852 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.45□□□□□ -0.1
P01852 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.45□□□□□ -0.1
P01852 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
P01852 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P01852 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
P01852 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
P01852 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
P01852 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.44□□□□□ -0.1
P01852 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
P01852 Gm27459-201ENSMUST00000184860 107 ntBASIC14.44□□□□□ -0.1
P01852 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.44□□□□□ -0.1
P01852 Gm43347-201ENSMUST00000200226 580 ntBASIC14.44□□□□□ -0.1
P01852 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.44□□□□□ -0.1
P01852 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.44□□□□□ -0.1
P01852 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
P01852 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P01852 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms