Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cldn1O88551 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cldn1O88551 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cldn1O88551 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Gm7222-201ENSMUST00000117512 906 ntBASIC13.55□□□□□ -0.24
Cldn1O88551 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cldn1O88551 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.55□□□□□ -0.24
Cldn1O88551 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.55□□□□□ -0.24
Cldn1O88551 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cldn1O88551 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cldn1O88551 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.55□□□□□ -0.24
Cldn1O88551 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cldn1O88551 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.55□□□□□ -0.24
Cldn1O88551 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.55□□□□□ -0.24
Cldn1O88551 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.55□□□□□ -0.24
Cldn1O88551 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cldn1O88551 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.55□□□□□ -0.24
Cldn1O88551 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cldn1O88551 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.54□□□□□ -0.24
Cldn1O88551 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.54□□□□□ -0.24
Cldn1O88551 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.54□□□□□ -0.24
Cldn1O88551 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.54□□□□□ -0.24
Cldn1O88551 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.54□□□□□ -0.24
Cldn1O88551 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.54□□□□□ -0.24
Cldn1O88551 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.54□□□□□ -0.24
Cldn1O88551 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.54□□□□□ -0.24
Cldn1O88551 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldn1O88551 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cldn1O88551 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.53□□□□□ -0.24
Cldn1O88551 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cldn1O88551 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.53□□□□□ -0.24
Cldn1O88551 Gm14701-201ENSMUST00000117156 348 ntBASIC13.53□□□□□ -0.24
Cldn1O88551 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.53□□□□□ -0.24
Cldn1O88551 Gm8655-201ENSMUST00000221159 852 ntBASIC13.53□□□□□ -0.24
Cldn1O88551 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Cldn1O88551 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldn1O88551 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cldn1O88551 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cldn1O88551 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cldn1O88551 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cldn1O88551 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms