Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.33■□□□□ 0.04
Cacna1hO88427 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Gm18766-201ENSMUST00000189811 808 ntBASIC15.33■□□□□ 0.04
Cacna1hO88427 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.33■□□□□ 0.04
Cacna1hO88427 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cacna1hO88427 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1hO88427 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.32■□□□□ 0.04
Cacna1hO88427 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1hO88427 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1hO88427 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.32■□□□□ 0.04
Cacna1hO88427 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.32■□□□□ 0.04
Cacna1hO88427 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1hO88427 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cacna1hO88427 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.32■□□□□ 0.04
Cacna1hO88427 Gm11425-201ENSMUST00000119608 498 ntBASIC15.32■□□□□ 0.04
Cacna1hO88427 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cacna1hO88427 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Gm2272-201ENSMUST00000194903 582 ntBASIC15.32■□□□□ 0.04
Cacna1hO88427 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.32■□□□□ 0.04
Cacna1hO88427 Gm9396-201ENSMUST00000076703 567 ntBASIC15.32■□□□□ 0.04
Cacna1hO88427 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1hO88427 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.31■□□□□ 0.04
Cacna1hO88427 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Gm18049-201ENSMUST00000208909 581 ntBASIC15.31■□□□□ 0.04
Cacna1hO88427 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1hO88427 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1hO88427 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Gm22189-201ENSMUST00000103822 86 ntBASIC15.3■□□□□ 0.04
Cacna1hO88427 Gm13015-201ENSMUST00000118674 204 ntBASIC15.3■□□□□ 0.04
Cacna1hO88427 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.3■□□□□ 0.04
Cacna1hO88427 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Gm17150-201ENSMUST00000165577 381 ntBASIC15.3■□□□□ 0.04
Cacna1hO88427 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.3■□□□□ 0.04
Cacna1hO88427 Gm8515-201ENSMUST00000194852 576 ntBASIC15.3■□□□□ 0.04
Cacna1hO88427 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.3■□□□□ 0.04
Cacna1hO88427 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cacna1hO88427 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1hO88427 Gm11543-201ENSMUST00000120758 370 ntBASIC15.29■□□□□ 0.04
Cacna1hO88427 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms