Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.49■□□□□ 0.23
Ttc3O88196 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.49■□□□□ 0.23
Ttc3O88196 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ttc3O88196 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.49■□□□□ 0.23
Ttc3O88196 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Gm18489-201ENSMUST00000172565 551 ntBASIC16.49■□□□□ 0.23
Ttc3O88196 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.49■□□□□ 0.23
Ttc3O88196 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ttc3O88196 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ttc3O88196 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ttc3O88196 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.48■□□□□ 0.23
Ttc3O88196 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Gm14722-201ENSMUST00000118943 689 ntBASIC16.48■□□□□ 0.23
Ttc3O88196 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.48■□□□□ 0.23
Ttc3O88196 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ttc3O88196 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.48■□□□□ 0.23
Ttc3O88196 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.47■□□□□ 0.23
Ttc3O88196 Gm27301-201ENSMUST00000184012 127 ntBASIC16.47■□□□□ 0.23
Ttc3O88196 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.47■□□□□ 0.23
Ttc3O88196 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ttc3O88196 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.47■□□□□ 0.23
Ttc3O88196 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ttc3O88196 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Ttc3O88196 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.47■□□□□ 0.23
Ttc3O88196 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ttc3O88196 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Ttc3O88196 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ttc3O88196 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.47■□□□□ 0.23
Ttc3O88196 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ttc3O88196 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ttc3O88196 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.46■□□□□ 0.23
Ttc3O88196 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.46■□□□□ 0.23
Ttc3O88196 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ttc3O88196 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.46■□□□□ 0.23
Ttc3O88196 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ttc3O88196 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ttc3O88196 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.46■□□□□ 0.23
Ttc3O88196 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ttc3O88196 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.46■□□□□ 0.23
Ttc3O88196 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ttc3O88196 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.46■□□□□ 0.22
Ttc3O88196 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.46■□□□□ 0.22
Ttc3O88196 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ttc3O88196 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ttc3O88196 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ttc3O88196 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms