Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Stx1aO35526 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.81■□□□□ 0.44
Stx1aO35526 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Stx1aO35526 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.81■□□□□ 0.44
Stx1aO35526 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Stx1aO35526 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.81■□□□□ 0.44
Stx1aO35526 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Sybu-209ENSMUST00000228639 4113 ntBASIC17.81■□□□□ 0.44
Stx1aO35526 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.81■□□□□ 0.44
Stx1aO35526 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Stx1aO35526 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.8■□□□□ 0.44
Stx1aO35526 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.8■□□□□ 0.44
Stx1aO35526 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.8■□□□□ 0.44
Stx1aO35526 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Stx1aO35526 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Gm10812-201ENSMUST00000099864 546 ntBASIC17.8■□□□□ 0.44
Stx1aO35526 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Stx1aO35526 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Stx1aO35526 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Stx1aO35526 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Stx1aO35526 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.8■□□□□ 0.44
Stx1aO35526 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.79■□□□□ 0.44
Stx1aO35526 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Stx1aO35526 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.79■□□□□ 0.44
Stx1aO35526 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.79■□□□□ 0.44
Stx1aO35526 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Stx1aO35526 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Stx1aO35526 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.78■□□□□ 0.44
Stx1aO35526 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Stx1aO35526 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Stx1aO35526 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Stx1aO35526 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Stx1aO35526 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Stx1aO35526 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Stx1aO35526 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Stx1aO35526 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.77■□□□□ 0.44
Stx1aO35526 Gm13436-201ENSMUST00000120418 567 ntBASIC17.77■□□□□ 0.44
Stx1aO35526 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.77■□□□□ 0.44
Stx1aO35526 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stx1aO35526 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms