Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Efnb3O35393 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.54□□□□□ -0.4
Efnb3O35393 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.53□□□□□ -0.4
Efnb3O35393 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Efnb3O35393 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.53□□□□□ -0.4
Efnb3O35393 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Efnb3O35393 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.53□□□□□ -0.4
Efnb3O35393 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.53□□□□□ -0.4
Efnb3O35393 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Efnb3O35393 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Efnb3O35393 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Efnb3O35393 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.52□□□□□ -0.4
Efnb3O35393 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Efnb3O35393 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.52□□□□□ -0.4
Efnb3O35393 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Efnb3O35393 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Efnb3O35393 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Efnb3O35393 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.52□□□□□ -0.41
Efnb3O35393 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Efnb3O35393 Gm18421-201ENSMUST00000204122 625 ntBASIC12.52□□□□□ -0.41
Efnb3O35393 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.52□□□□□ -0.41
Efnb3O35393 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Efnb3O35393 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Efnb3O35393 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Efnb3O35393 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Efnb3O35393 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Efnb3O35393 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efnb3O35393 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Efnb3O35393 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.51□□□□□ -0.41
Efnb3O35393 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.51□□□□□ -0.41
Efnb3O35393 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Gm27463-201ENSMUST00000183569 57 ntBASIC12.51□□□□□ -0.41
Efnb3O35393 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.51□□□□□ -0.41
Efnb3O35393 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms