Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Birc2-201ENSMUST00000054878 378 ntBASIC14.87□□□□□ -0.03
Cx3cl1O35188 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Gm34391-201ENSMUST00000203706 907 ntBASIC14.86□□□□□ -0.03
Cx3cl1O35188 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cx3cl1O35188 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Gm7153-201ENSMUST00000117092 455 ntBASIC14.85□□□□□ -0.03
Cx3cl1O35188 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.85□□□□□ -0.03
Cx3cl1O35188 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cx3cl1O35188 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Gm24589-201ENSMUST00000116692 94 ntBASIC14.84□□□□□ -0.03
Cx3cl1O35188 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Gm25745-201ENSMUST00000174945 133 ntBASIC14.84□□□□□ -0.03
Cx3cl1O35188 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms