Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11bO08712 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.08■□□□□ 0.17
Tnfrsf11bO08712 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11bO08712 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Gm11950-201ENSMUST00000121615 838 ntBASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Gm6257-201ENSMUST00000163864 910 ntBASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11bO08712 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11bO08712 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Gm45328-201ENSMUST00000210942 917 ntBASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf11bO08712 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf11bO08712 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms