Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3tc1G3X9F6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Gm18246-201ENSMUST00000221023 728 ntBASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3tc1G3X9F6 Haglr-201ENSMUST00000100000 2085 ntBASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Gm11745-201ENSMUST00000121669 448 ntBASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3tc1G3X9F6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3tc1G3X9F6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Gm13365-201ENSMUST00000121188 973 ntBASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Gm44335-201ENSMUST00000196879 141 ntBASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Gm44297-201ENSMUST00000198304 141 ntBASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Gm44346-201ENSMUST00000198851 141 ntBASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Gm5312-201ENSMUST00000203728 547 ntBASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc1G3X9F6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms