Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.32□□□□□ -0.12
Gm3543D3Z235 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Gm43347-201ENSMUST00000200226 580 ntBASIC14.31□□□□□ -0.12
Gm3543D3Z235 Gm34391-201ENSMUST00000203706 907 ntBASIC14.31□□□□□ -0.12
Gm3543D3Z235 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3543D3Z235 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.3□□□□□ -0.12
Gm3543D3Z235 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.3□□□□□ -0.12
Gm3543D3Z235 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.3□□□□□ -0.12
Gm3543D3Z235 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.3□□□□□ -0.12
Gm3543D3Z235 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3543D3Z235 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Gm27459-201ENSMUST00000184860 107 ntBASIC14.29□□□□□ -0.12
Gm3543D3Z235 Gm28659-201ENSMUST00000188013 759 ntBASIC14.29□□□□□ -0.12
Gm3543D3Z235 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3543D3Z235 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm3543D3Z235 Gm12644-201ENSMUST00000119935 606 ntBASIC14.28□□□□□ -0.12
Gm3543D3Z235 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms