Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a5A6H584 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col6a5A6H584 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a5A6H584 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.87□□□□□ -0.51
Col6a5A6H584 Gm42612-201ENSMUST00000197986 623 ntBASIC11.87□□□□□ -0.51
Col6a5A6H584 Gm43170-201ENSMUST00000199827 612 ntBASIC11.87□□□□□ -0.51
Col6a5A6H584 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.87□□□□□ -0.51
Col6a5A6H584 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col6a5A6H584 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.87□□□□□ -0.51
Col6a5A6H584 Gm37424-201ENSMUST00000191727 561 ntBASIC11.87□□□□□ -0.51
Col6a5A6H584 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a5A6H584 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col6a5A6H584 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.86□□□□□ -0.51
Col6a5A6H584 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a5A6H584 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.86□□□□□ -0.51
Col6a5A6H584 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.86□□□□□ -0.51
Col6a5A6H584 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.86□□□□□ -0.51
Col6a5A6H584 Gm36967-201ENSMUST00000193814 266 ntBASIC11.86□□□□□ -0.51
Col6a5A6H584 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a5A6H584 AC123834.2-201ENSMUST00000224038 2340 ntBASIC11.86□□□□□ -0.51
Col6a5A6H584 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Col6a5A6H584 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a5A6H584 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.86□□□□□ -0.51
Col6a5A6H584 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Col6a5A6H584 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a5A6H584 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.86□□□□□ -0.51
Col6a5A6H584 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC11.86□□□□□ -0.51
Col6a5A6H584 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Gm12176-201ENSMUST00000121420 875 ntBASIC11.85□□□□□ -0.51
Col6a5A6H584 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Gm18018-201ENSMUST00000198273 408 ntBASIC11.85□□□□□ -0.51
Col6a5A6H584 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Gm12957-201ENSMUST00000117835 377 ntBASIC11.85□□□□□ -0.51
Col6a5A6H584 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a5A6H584 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Col6a5A6H584 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a5A6H584 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms