Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Gm2810-201ENSMUST00000118681 990 ntBASIC12.77□□□□□ -0.37
Chd6A3KFM7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.77□□□□□ -0.37
Chd6A3KFM7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Chd6A3KFM7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm22189-201ENSMUST00000103822 86 ntBASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm29667-201ENSMUST00000190817 490 ntBASIC12.76□□□□□ -0.37
Chd6A3KFM7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.76□□□□□ -0.37
Chd6A3KFM7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chd6A3KFM7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.75□□□□□ -0.37
Chd6A3KFM7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Chd6A3KFM7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd6A3KFM7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.75□□□□□ -0.37
Chd6A3KFM7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Gm18489-201ENSMUST00000172565 551 ntBASIC12.75□□□□□ -0.37
Chd6A3KFM7 Gm18737-201ENSMUST00000173594 937 ntBASIC12.75□□□□□ -0.37
Chd6A3KFM7 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.75□□□□□ -0.37
Chd6A3KFM7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd6A3KFM7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Mir7070-201ENSMUST00000183657 86 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Gm43703-201ENSMUST00000200523 763 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms