Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc112A0AUP1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc112A0AUP1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc112A0AUP1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ccdc112A0AUP1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.07■□□□□ 0.48
Ccdc112A0AUP1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Gm10252-201ENSMUST00000209541 832 ntBASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc112A0AUP1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms