Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-30A0A140T8M3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-30A0A140T8M3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Mir6349-201ENSMUST00000184059 97 ntBASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-30A0A140T8M3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-30A0A140T8M3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms