Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.9■□□□□ 0.62
Cfap99A0A140LIX9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap99A0A140LIX9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap99A0A140LIX9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap99A0A140LIX9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cfap99A0A140LIX9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cfap99A0A140LIX9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cfap99A0A140LIX9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cfap99A0A140LIX9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Gm15467-201ENSMUST00000120582 445 ntBASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap99A0A140LIX9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cfap99A0A140LIX9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap99A0A140LIX9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Gm15173-201ENSMUST00000122049 433 ntBASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.86■□□□□ 0.61
Cfap99A0A140LIX9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms