Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lcmt1A0A0U1RNF2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lcmt1A0A0U1RNF2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lcmt1A0A0U1RNF2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lcmt1A0A0U1RNF2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lcmt1A0A0U1RNF2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.61■□□□□ 0.41
Lcmt1A0A0U1RNF2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gm13312-201ENSMUST00000119631 718 ntBASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lcmt1A0A0U1RNF2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lcmt1A0A0U1RNF2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.58■□□□□ 0.41
Lcmt1A0A0U1RNF2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lcmt1A0A0U1RNF2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lcmt1A0A0U1RNF2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms