Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13d-4A0A0G2JFX3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm21814-202ENSMUST00000203277 873 ntBASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm7370-201ENSMUST00000219471 767 ntBASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm10812-201ENSMUST00000099864 546 ntBASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm11336-201ENSMUST00000118168 334 ntBASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm5417-201ENSMUST00000079706 384 ntBASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms