Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Gm43183-201ENSMUST00000200632 547 ntBASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-5A0A075B6B5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-5A0A075B6B5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav6-5A0A075B6B5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Gm27405-201ENSMUST00000184201 112 ntBASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Gm18666-201ENSMUST00000190039 958 ntBASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Gm38027-201ENSMUST00000192315 235 ntBASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-5A0A075B6B5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms