Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav8-1A0A075B641 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Gm6576-201ENSMUST00000169678 883 ntBASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav8-1A0A075B641 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Gm11643-201ENSMUST00000119578 864 ntBASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav8-1A0A075B641 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav8-1A0A075B641 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms