Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm7213-201ENSMUST00000215977 950 ntBASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15d-1-dv6d-1A0A075B624 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms